CDS

Accession Number TCMCG006C68789
gbkey CDS
Protein Id XP_013708144.1
Location join(33427737..33427921,33428030..33428114,33428193..33428427,33428518..33428756,33428863..33429114,33429205..33429385,33429484..33429572,33429657..33429730,33429803..33429881)
Gene LOC106411846
GeneID 106411846
Organism Brassica napus

Protein

Length 472aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013852690.2
Definition DEAD-box ATP-dependent RNA helicase 12 isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description Belongs to the DEAD box helicase family
KEGG_TC -
KEGG_Module M00395        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K12614        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000932        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010494        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033962        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATAACAACAGAGGAAGATATCCACCGGGGATGGGAACGGGACGTGGAGCGCCGCCTAATCCCGATTATCAATCGCAGAACCATCATCAGCAACAGTGGACAAGACGCGCTCAGCTTCCTGGAAACGCTAATGAGGTCCAGAAGACGACGTCTCCGCCGCCCGTAGCTAGCAGCGACCCTAAACTGTGTTCTCCGTTTACTCTCAGTGGCCAAGATTGGAAGGCAACGTTGAGGCTCCCACCTCCCGATACTCGTTACCAGACTGCGGATGTGACAGCTACTAAAGGAAACGAATTCGAAGATTACTTTCTGAAAAGAGATCTGCTCAAGGGGATATACGAGAAGGGCTTCGAGAAGCCATCTCCTATTCAAGAAGAGAGCATTCCCATTGCTTTAACCGGTAGTGATATTCTTGCTAGAGCCAAAAACGGCACAGGGAAGACTGGTGCCTTCTGCATCCCAGTCCTAGAGAGAATTGATCCTAATACCAATGTTATTCAAGCCATGATTCTAGTTCCAACACGAGAGCTAGCTCTTCAGACATCACAGGTTTGCAAGGAGCTTTCCAAGTACTTGAACATCCAGGTTATGGTCACCACTGGTGGTACCAGTCTGAGAGATGATATCATGCGGTTACATCAACCTGTGCATCTGCTCGTTGGAACTCCTGGAAGGATCTTGGATCTTACCAAAAAGGGAGTTTGTGTTTTGAAAGACTGTACGATGCTTGTCATGGATGAGGCCGACAAGCTTTTATCGGCAGAGTTCCAACCTTCTCTAGAGGAATTGATACAGTTTCTGCCACAGAATCGTCAGTTTTTGATGTATTCCGCTACATTTCCTGTTACTGTGAAAGCCTTTAAGGATCGACATCTCCGGAAGCCATATGTTATCAATCTCATGGATCAACTCACGCTTATGGGTGTCACACAATATTACGCTTTTGTTGAAGAGAGACAGAAGGTTCACTGCCTCAACACACTTTTCTCTAAGCTGCAAATAAACCAATCGATCATCTTTTGCAACTCTGTCAATCGCGTGGAACTGTTGGCAAAGAAAATTACAGAACTCGGTTATTCGTGCTTCTACATTCATGCGAAGATGGTTCAAGACCATAGGAACAGAGTGTTCCATGAGTTCCGCAATGGTGCTTGCAGAAATCTCGTTTGCACTGATCTGTTTACTCGTGGAATTGACATTCAAGCTGTGAATGTAGTGATTAACTTTGATTTTCCTAGGACGTCTGAGTCGTATCTACACAGGGTGGGCCGATCAGGACGTTTTGGACACCTTGGGTTAGCTGTGAATTTGGTAACCTATGAGGACCGTTTTAAAATGTATCAGACTGAGCAAGAACTTGGCACTGAAATCAAACCAATTCCTTCGAATATCGATCAAGCAATCTACTGCCAGTAA
Protein:  
MNNNRGRYPPGMGTGRGAPPNPDYQSQNHHQQQWTRRAQLPGNANEVQKTTSPPPVASSDPKLCSPFTLSGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLERIDPNTNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCTMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMYSATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSNIDQAIYCQ